Flowering-associated gene expression and metabolic characteristics in adzuki bean (Vigna angularis L.) with different short-day induction periods

doi:10.7717/peerj.17716

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	Flowering-associated gene expression and metabolic characteristics in adzuki bean (Vigna angularis L.) with different short-day induction periods
	Dong, Weixin 1,2; Li, Dongxiao 2; Zhang, Lei 2,3; Tao, Peijun 2; Zhang, Yuechen 2
	2024-07-18
发表期刊	PEERJ
ISSN	2167-8359
卷号	12
摘要	Background: The adzuki bean is a typical short-day plant and an important grain crop that is widely used due to its high nutritional and medicinal value. The adzuki bean flowering time is affected by multiple environmental factors, particularly the photoperiod. Adjusting the day length can induce flower synchronization in adzuki bean and accelerate the breeding process. In this study, we used RNA sequencing analysis to determine the effects of different day lengths on gene expression and metabolic characteristics related to adzuki bean flowering time. Methods: 'Tangshan hong xiao dou' was used as the experimental material in this study and field experiments were conducted in 2022 using a randomized block design with three treatments: short-day induction periods of 5 d (SD-5d), 10 d (SD-10d), and 15 d (SD-15d). Results: A total of 5,939 differentially expressed genes (DEGs) were identified, of which 38.09% were up-regulated and 23.81% were down-regulated. Gene ontology enrichment analysis was performed on the target genes to identify common functions related to photosystems I and II. Kyoto Encyclopedia of Genes and Genomes enrichment analysis identified two pathways involved in the antenna protein and circadian rhythm. Furthermore, florescence was promoted by down-regulating genes in the circadian rhythm pathway through the blue light metabolic pathway; whereas, antenna proteins promoted flowering by enhancing the reception of light signals and accelerating electron transport. In these two metabolic pathways, the number of DEGs was the greatest between the SD-5d VS SD-15d groups. Real-time reverse transcription-quantitative polymerase chain reaction analysis results of eight DEGs were consistent with the sequencing results. Thus, the sequencing results were accurate and reliable and eight genes were identified as candidates for the regulation of short-day induction at the adzuki bean seedling stage. Conclusions: Short-day induction was able to down-regulate the expression of genes related to flowering according to the circadian rhythm and up-regulate the expression of certain genes in the antenna protein pathway. The results provide a theoretical reference for the molecular mechanism of short-day induction and multi-level information for future functional studies to verify the key genes regulating adzuki bean flowering.
关键词	Adzuki bean Short-day induction Transcriptome Gene expression Metabolic characteristics qRT-PCR
其他关键词	A/B-BINDING PROTEINS ; CIRCADIAN CLOCK ; FLORAL INDUCTION ; TIME ; MATURITY ; E9
DOI	10.7717/peerj.17716
收录类别	SCIE
语种	英语
WOS研究方向	Science & Technology - Other Topics
WOS类目	Multidisciplinary Sciences
WOS记录号	WOS:001273834300001
出版者	PEERJ INC
原始文献类型	Article
引用统计	被引频次[WOS]：0 [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.library.ouchn.edu.cn/handle/39V7QQFX/171580
专题	国家开放大学
通讯作者	Zhang, Yuechen
作者单位	1.Hebei Open Univ, Coll Agron & Med, Shijiazhuang, Hebei, Peoples R China; 2.Hebei Agr Univ, Coll Agron, Baoding, Hebei, Peoples R China; 3.Zaozhuang Univ, Coll Life Sci, Zaozhuang, Shandong, Peoples R China
推荐引用方式 GB/T 7714	Dong, Weixin,Li, Dongxiao,Zhang, Lei,et al. Flowering-associated gene expression and metabolic characteristics in adzuki bean (Vigna angularis L.) with different short-day induction periods[J]. PEERJ,2024,12.
APA	Dong, Weixin,Li, Dongxiao,Zhang, Lei,Tao, Peijun,&Zhang, Yuechen.(2024).Flowering-associated gene expression and metabolic characteristics in adzuki bean (Vigna angularis L.) with different short-day induction periods.PEERJ,12.
MLA	Dong, Weixin,et al."Flowering-associated gene expression and metabolic characteristics in adzuki bean (Vigna angularis L.) with different short-day induction periods".PEERJ 12(2024).